STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
skfE_2SkfA peptide export ATP-binding protein SkfE. (83 aa)    
Predicted Functional Partners:
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
 
  0.805
KLU62106.1
Fluoroquinolones export ATP-binding proteinc.
  
 
  0.775
KLU59863.1
ABC-2 family transporter protein.
  
 0.690
KLU58647.1
ABC-2 family transporter protein.
  
 0.690
yxlF_2
Putative ABC transporter ATP-binding protein YxlF.
  
     0.681
KLU62845.1
Fluoroquinolones export ATP-binding proteinc.
  
 
  0.647
KLU62374.1
ABC-2 family transporter protein.
  
 0.647
drrA_3
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
     0.635
KLU61087.1
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.594
KLU61088.1
Plasmid stabilization system protein.
       0.594
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.