STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
actP_2Copper-transporting P-type ATPase. (875 aa)    
Predicted Functional Partners:
copA_3
Copper-exporting P-type ATPase A.
 
 
0.775
copA_2
Copper-exporting P-type ATPase A.
 
 
0.774
actP_1
Copper-transporting P-type ATPase.
  
 
 0.746
copZ
Copper chaperone CopZ.
  
 
 0.746
copA_1
Copper-exporting P-type ATPase A.
  
 
 0.684
KLU62527.1
Hypothetical protein; Transcriptional repressor SmtB homolog.
  
  
 0.631
cadC
Cadmium resistance transcriptional regulatory protein CadC.
  
  
 0.631
KLU63402.1
Putative HTH-type transcriptional regulator.
  
  
 0.574
yloB_1
Calcium-transporting ATPase.
 
 
0.463
yloB_2
Calcium-transporting ATPase.
 
0.461
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.