Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU60149.1 | gutB_4 | CEB3_c35800 | CEB3_c30280 | Putative pyridoxal phosphate-dependent acyltransferase. | Sorbitol dehydrogenase. | 0.724 |
KLU60149.1 | nifJ_2 | CEB3_c35800 | CEB3_c27260 | Putative pyridoxal phosphate-dependent acyltransferase. | Pyruvate-flavodoxin oxidoreductase. | 0.400 |
KLU60149.1 | nifJ_4 | CEB3_c35800 | CEB3_c47060 | Putative pyridoxal phosphate-dependent acyltransferase. | Pyruvate-flavodoxin oxidoreductase. | 0.400 |
crh_2 | gutB_4 | CEB3_c30290 | CEB3_c30280 | HPr-like protein Crh. | Sorbitol dehydrogenase. | 0.773 |
crh_2 | lacC_1 | CEB3_c30290 | CEB3_c30270 | HPr-like protein Crh. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.772 |
crh_2 | mtlA | CEB3_c30290 | CEB3_c30240 | HPr-like protein Crh. | PTS system mannitol-specific EIICBA component. | 0.920 |
crh_2 | mtlF | CEB3_c30290 | CEB3_c30260 | HPr-like protein Crh. | Mannitol-specific phosphotransferase enzyme IIA component. | 0.918 |
crh_2 | mtlR_1 | CEB3_c30290 | CEB3_c30250 | HPr-like protein Crh. | Transcriptional regulator MtlR. | 0.900 |
gutB_4 | KLU60149.1 | CEB3_c30280 | CEB3_c35800 | Sorbitol dehydrogenase. | Putative pyridoxal phosphate-dependent acyltransferase. | 0.724 |
gutB_4 | crh_2 | CEB3_c30280 | CEB3_c30290 | Sorbitol dehydrogenase. | HPr-like protein Crh. | 0.773 |
gutB_4 | lacC_1 | CEB3_c30280 | CEB3_c30270 | Sorbitol dehydrogenase. | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.764 |
gutB_4 | mtlA | CEB3_c30280 | CEB3_c30240 | Sorbitol dehydrogenase. | PTS system mannitol-specific EIICBA component. | 0.885 |
gutB_4 | mtlF | CEB3_c30280 | CEB3_c30260 | Sorbitol dehydrogenase. | Mannitol-specific phosphotransferase enzyme IIA component. | 0.855 |
gutB_4 | mtlR_1 | CEB3_c30280 | CEB3_c30250 | Sorbitol dehydrogenase. | Transcriptional regulator MtlR. | 0.822 |
gutB_4 | nifJ_1 | CEB3_c30280 | CEB3_c04240 | Sorbitol dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.735 |
gutB_4 | nifJ_2 | CEB3_c30280 | CEB3_c27260 | Sorbitol dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.796 |
gutB_4 | nifJ_3 | CEB3_c30280 | CEB3_c44130 | Sorbitol dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.788 |
gutB_4 | nifJ_4 | CEB3_c30280 | CEB3_c47060 | Sorbitol dehydrogenase. | Pyruvate-flavodoxin oxidoreductase. | 0.796 |
lacC_1 | crh_2 | CEB3_c30270 | CEB3_c30290 | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | HPr-like protein Crh. | 0.772 |
lacC_1 | gutB_4 | CEB3_c30270 | CEB3_c30280 | Tagatose-6-phosphate kinase; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | Sorbitol dehydrogenase. | 0.764 |
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