Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
apu | ccpA_2 | CEB3_c25430 | CEB3_c30610 | Amylopullulanase precursor. | Catabolite control protein A. | 0.708 |
apu | guaA | CEB3_c25430 | CEB3_c34990 | Amylopullulanase precursor. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.458 |
apu | iolC_1 | CEB3_c25430 | CEB3_c30600 | Amylopullulanase precursor. | 5-dehydro-2-deoxygluconokinase. | 0.422 |
apu | ptsG | CEB3_c25430 | CEB3_c20160 | Amylopullulanase precursor. | PTS system glucose-specific EIICBA component. | 0.979 |
apu | pyk | CEB3_c25430 | CEB3_c50580 | Amylopullulanase precursor. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.875 |
ccpA_2 | apu | CEB3_c30610 | CEB3_c25430 | Catabolite control protein A. | Amylopullulanase precursor. | 0.708 |
ccpA_2 | crh_1 | CEB3_c30610 | CEB3_c00480 | Catabolite control protein A. | HPr-like protein Crh. | 0.538 |
ccpA_2 | crh_2 | CEB3_c30610 | CEB3_c30290 | Catabolite control protein A. | HPr-like protein Crh. | 0.538 |
ccpA_2 | guaA | CEB3_c30610 | CEB3_c34990 | Catabolite control protein A. | GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.530 |
ccpA_2 | iolC_1 | CEB3_c30610 | CEB3_c30600 | Catabolite control protein A. | 5-dehydro-2-deoxygluconokinase. | 0.621 |
ccpA_2 | ptsG | CEB3_c30610 | CEB3_c20160 | Catabolite control protein A. | PTS system glucose-specific EIICBA component. | 0.728 |
ccpA_2 | ptsH_1 | CEB3_c30610 | CEB3_c20100 | Catabolite control protein A. | Phosphocarrier protein HPr. | 0.538 |
ccpA_2 | ptsH_2 | CEB3_c30610 | CEB3_c31850 | Catabolite control protein A. | Phosphocarrier protein HPr. | 0.538 |
ccpA_2 | pyk | CEB3_c30610 | CEB3_c50580 | Catabolite control protein A. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.613 |
ccpA_2 | rbsC_5 | CEB3_c30610 | CEB3_c18110 | Catabolite control protein A. | Ribose transport system permease protein RbsC; Belongs to the binding-protein-dependent transport system permease family. | 0.595 |
crh_1 | ccpA_2 | CEB3_c00480 | CEB3_c30610 | HPr-like protein Crh. | Catabolite control protein A. | 0.538 |
crh_1 | ptsG | CEB3_c00480 | CEB3_c20160 | HPr-like protein Crh. | PTS system glucose-specific EIICBA component. | 0.875 |
crh_1 | pyk | CEB3_c00480 | CEB3_c50580 | HPr-like protein Crh. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.580 |
crh_2 | ccpA_2 | CEB3_c30290 | CEB3_c30610 | HPr-like protein Crh. | Catabolite control protein A. | 0.538 |
crh_2 | ptsG | CEB3_c30290 | CEB3_c20160 | HPr-like protein Crh. | PTS system glucose-specific EIICBA component. | 0.875 |
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