STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxuAMannonate dehydratase; Catalyzes the dehydration of D-mannonate. (353 aa)    
Predicted Functional Partners:
por
polyol:NADP oxidoreductase.
 
 0.986
uxaB
Altronate oxidoreductase.
 
 0.923
KLU60107.1
Hypothetical protein.
  
  
 0.903
uxaA
Altronate dehydratase.
 
 
 0.863
kdgK_1
2-dehydro-3-deoxygluconokinase.
 
  
 0.845
suyA
(2R)-sulfolactate sulfo-lyase subunit alpha.
 
 
 0.784
iolC_4
5-dehydro-2-deoxygluconokinase.
 
  
 0.773
rpiB
Ribose-5-phosphate isomerase B.
   
 
  0.738
gntZ
6-phosphogluconate dehydrogenase, NAD(+)-dependent, decarboxylating.
    
 0.729
suyB
(2R)-sulfolactate sulfo-lyase subunit beta.
  
 
 0.725
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.