STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU60168.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
KLU60169.1
Hypothetical protein.
       0.777
KLU60167.1
Hypothetical protein.
       0.757
hipB
Antitoxin HipB.
 
     0.609
KLU61015.1
Hypothetical protein.
  
     0.602
KLU60281.1
PD-(D/E)XK nuclease family transposase.
  
     0.498
KLU60182.1
Hypothetical protein.
  
     0.498
KLU60170.1
Phage protein Gp37/Gp68.
       0.472
deaD
ATP-dependent RNA helicase DeaD.
       0.472
KLU61422.1
Hypothetical protein.
  
     0.464
KLU62868.1
Hypothetical protein.
  
     0.461
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.