STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimB_3GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase. (375 aa)    
Predicted Functional Partners:
rfbM
Mannose-1-phosphate guanylyltransferase RfbM.
 
 
 0.863
mfpsA
Mannosylfructose-phosphate synthase.
  
 0.836
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.804
otsA
Trehalose-phosphate synthase.
  
 0.753
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.743
wcaJ_1
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.707
hddC_3
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
  
 0.706
apu
Amylopullulanase precursor.
   
 0.691
KLU63592.1
Hypothetical protein.
  
 
 0.622
KLU60317.1
NAD dependent epimerase/dehydratase family protein.
  
 
 0.622
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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