STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appAOligopeptide-binding protein AppA precursor. (568 aa)    
Predicted Functional Partners:
dppB_3
Dipeptide transport system permease protein DppB.
 0.945
dppB_2
Dipeptide transport system permease protein DppB.
 0.943
dppC_2
Dipeptide transport system permease protein DppC.
 0.939
dppB_1
Dipeptide transport system permease protein DppB.
 0.895
dppC_1
Dipeptide transport system permease protein DppC.
 0.893
gsiC_1
Glutathione transport system permease protein GsiC.
 0.893
gsiC_2
Glutathione transport system permease protein GsiC.
 0.893
gsiD_1
Glutathione transport system permease protein GsiD.
 0.892
gsiC_3
Glutathione transport system permease protein GsiC.
 0.891
gsiD_2
Glutathione transport system permease protein GsiD.
 0.889
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.