STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ndhS_7Nicotinate dehydrogenase small FeS subunit. (178 aa)    
Predicted Functional Partners:
cutM
Carbon monoxide dehydrogenase medium chain.
 0.997
hcrA_3
4-hydroxybenzoyl-CoA reductase subunit alpha.
 0.997
hcrA_1
4-hydroxybenzoyl-CoA reductase subunit alpha.
 0.991
hcrA_2
4-hydroxybenzoyl-CoA reductase subunit alpha.
 0.991
xdhA_2
Xanthine dehydrogenase molybdenum-binding subunit.
 0.991
ndhL
Nicotinate dehydrogenase large molybdopterin subunit.
 0.991
ndhM
Nicotinate dehydrogenase medium molybdopterin subunit.
 0.991
xdhA_6
Xanthine dehydrogenase molybdenum-binding subunit.
 0.991
coxM_1
Carbon monoxide dehydrogenase medium chain.
 0.990
coxM_3
Carbon monoxide dehydrogenase medium chain.
 0.989
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.