STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftnAPutative ferritin-1; Iron-storage protein. (177 aa)    
Predicted Functional Partners:
dfx
Desulfoferrodoxin.
 
  
 0.881
rd
Rubredoxin.
  
  
 0.792
recQ_1
ATP-dependent DNA helicase RecQ.
 
  
   0.705
msrAB
Peptide methionine sulfoxide reductase MsrA/MsrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
 
 
 
 0.642
ahpC
Alkyl hydroperoxide reductase subunit C.
  
  
 0.630
prxU
Selenocysteine-containing peroxiredoxin PrxU.
  
  
 0.630
KLU59750.1
Ubiquinone biosynthesis protein COQ7.
     
 0.600
KLU59167.1
Hypothetical protein.
     
 0.600
rpsP
30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.
  
    0.528
dnaJ_1
Chaperone protein DnaJ.
 
 
 
 0.484
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.