Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU58656.1 | KLU60212.1 | CEB3_c46720 | CEB3_c36430 | Cupin domain protein. | Phosphonate metabolism transcriptional regulator PhnF. | 0.471 |
KLU58656.1 | KLU60818.1 | CEB3_c46720 | CEB3_c27910 | Cupin domain protein. | Carboxymuconolactone decarboxylase family protein. | 0.478 |
KLU58656.1 | cdr | CEB3_c46720 | CEB3_c15300 | Cupin domain protein. | Coenzyme A disulfide reductase. | 0.505 |
KLU58656.1 | cheC | CEB3_c46720 | CEB3_c32430 | Cupin domain protein. | CheY-P phosphatase CheC. | 0.440 |
KLU58656.1 | fliN | CEB3_c46720 | CEB3_c32320 | Cupin domain protein. | Flagellar motor switch protein FliN. | 0.440 |
KLU58656.1 | metG | CEB3_c46720 | CEB3_c15950 | Cupin domain protein. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.603 |
KLU58656.1 | nqrF_4 | CEB3_c46720 | CEB3_c46710 | Cupin domain protein. | Na(+)-translocating NADH-quinone reductase subunit F. | 0.429 |
KLU58656.1 | pomA | CEB3_c46720 | CEB3_c17150 | Cupin domain protein. | Chemotaxis protein PomA. | 0.497 |
KLU58656.1 | purB | CEB3_c46720 | CEB3_c34950 | Cupin domain protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.502 |
KLU58656.1 | sigA | CEB3_c46720 | CEB3_c37680 | Cupin domain protein. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.463 |
KLU60212.1 | KLU58656.1 | CEB3_c36430 | CEB3_c46720 | Phosphonate metabolism transcriptional regulator PhnF. | Cupin domain protein. | 0.471 |
KLU60818.1 | KLU58656.1 | CEB3_c27910 | CEB3_c46720 | Carboxymuconolactone decarboxylase family protein. | Cupin domain protein. | 0.478 |
KLU60818.1 | purB | CEB3_c27910 | CEB3_c34950 | Carboxymuconolactone decarboxylase family protein. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.528 |
cdr | KLU58656.1 | CEB3_c15300 | CEB3_c46720 | Coenzyme A disulfide reductase. | Cupin domain protein. | 0.505 |
cdr | cheC | CEB3_c15300 | CEB3_c32430 | Coenzyme A disulfide reductase. | CheY-P phosphatase CheC. | 0.423 |
cdr | fliN | CEB3_c15300 | CEB3_c32320 | Coenzyme A disulfide reductase. | Flagellar motor switch protein FliN. | 0.590 |
cdr | metG | CEB3_c15300 | CEB3_c15950 | Coenzyme A disulfide reductase. | methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.590 |
cdr | sigA | CEB3_c15300 | CEB3_c37680 | Coenzyme A disulfide reductase. | RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.833 |
cheC | KLU58656.1 | CEB3_c32430 | CEB3_c46720 | CheY-P phosphatase CheC. | Cupin domain protein. | 0.440 |
cheC | cdr | CEB3_c32430 | CEB3_c15300 | CheY-P phosphatase CheC. | Coenzyme A disulfide reductase. | 0.423 |
page 1 of 2