Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KLU58708.1 | KLU59195.1 | CEB3_c47240 | CEB3_c41810 | HD domain protein. | Hypothetical protein. | 0.475 |
KLU58708.1 | KLU62132.1 | CEB3_c47240 | CEB3_c14950 | HD domain protein. | Hypothetical protein. | 0.495 |
KLU58708.1 | glnD | CEB3_c47240 | CEB3_c15540 | HD domain protein. | Bifunctional uridylyltransferase/uridylyl-removing enzyme. | 0.438 |
KLU58708.1 | secD | CEB3_c47240 | CEB3_c47250 | HD domain protein. | Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.697 |
KLU58708.1 | secF | CEB3_c47240 | CEB3_c47260 | HD domain protein. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.697 |
KLU59195.1 | KLU58708.1 | CEB3_c41810 | CEB3_c47240 | Hypothetical protein. | HD domain protein. | 0.475 |
KLU59195.1 | KLU62132.1 | CEB3_c41810 | CEB3_c14950 | Hypothetical protein. | Hypothetical protein. | 0.727 |
KLU62132.1 | KLU58708.1 | CEB3_c14950 | CEB3_c47240 | Hypothetical protein. | HD domain protein. | 0.495 |
KLU62132.1 | KLU59195.1 | CEB3_c14950 | CEB3_c41810 | Hypothetical protein. | Hypothetical protein. | 0.727 |
glnD | KLU58708.1 | CEB3_c15540 | CEB3_c47240 | Bifunctional uridylyltransferase/uridylyl-removing enzyme. | HD domain protein. | 0.438 |
secD | KLU58708.1 | CEB3_c47250 | CEB3_c47240 | Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | HD domain protein. | 0.697 |
secD | secF | CEB3_c47250 | CEB3_c47260 | Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |
secF | KLU58708.1 | CEB3_c47260 | CEB3_c47240 | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | HD domain protein. | 0.697 |
secF | secD | CEB3_c47260 | CEB3_c47250 | Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA. | 0.999 |