STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
potA_2Spermidine/putrescine import ATP-binding protein PotA; Belongs to the ABC transporter superfamily. (438 aa)    
Predicted Functional Partners:
cysW_2
Sulfate transport system permease protein CysW.
 
 0.967
pgtC
Phosphoglycerate transport regulatory protein PgtC precursor.
 
 0.959
sugB_3
Trehalose transport system permease protein SugB.
 
 
 0.946
cysW_1
Sulfate transport system permease protein CysW.
  
  0.938
phnV_2
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 
 
 0.934
modB
Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 0.932
futA1
Iron uptake protein A1 precursor.
 
 0.810
ugpC_1
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
 
 
 
0.723
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
 
 
0.711
phnV_1
Putative 2-aminoethylphosphonate transport system permease protein PhnV.
 
 0.710
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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