STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU58771.1Putative ABC transporter ATP-binding protein. (249 aa)    
Predicted Functional Partners:
sufB
FeS cluster assembly protein SufB.
 
 
 0.999
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
  
 0.926
csd
Putative cysteine desulfurase.
  
  
 0.857
KLU60822.1
Hypothetical protein.
  
  
 0.857
KLU61215.1
Hypothetical protein.
  
 
 0.708
KLU58770.1
MOSC domain protein.
       0.592
trxB_1
Thioredoxin reductase.
  
  
 0.545
nrdZ
Vitamin B12-dependent ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.542
trxB_2
Thioredoxin reductase.
 
  
 0.475
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
     
 0.473
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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