STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dppA_2D-aminopeptidase. (271 aa)    
Predicted Functional Partners:
KLU62146.1
Peptidase family S58.
   
 0.829
ykfA
Putative murein peptide carboxypeptidase.
 
    0.712
gsiC_3
Glutathione transport system permease protein GsiC.
  
 0.597
KLU58883.1
Hypothetical protein.
 
     0.592
dan
D-aminoacylase.
  
     0.519
mepH
Murein DD-endopeptidase MepH precursor.
  
    0.481
KLU61007.1
Hypothetical protein.
  
     0.479
KLU60498.1
Hypothetical protein.
  
     0.479
oppA_2
Periplasmic oligopeptide-binding protein precursor.
       0.465
gsiD_2
Glutathione transport system permease protein GsiD.
 
  
 0.431
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.