STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLU59092.1Iron-dicitrate transporter substrate-binding subunit. (381 aa)    
Predicted Functional Partners:
KLU59093.1
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.984
KLU59088.1
Putative ABC transporter ATP-binding protein.
 
 0.978
KLU59922.1
Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.958
yusV
Putative siderophore transport system ATP-binding protein YusV.
 
 0.921
KLU59089.1
Hypothetical protein.
 
    0.858
KLU59091.1
S-adenosyl-L-methionine-binding protein.
 
     0.683
KLU59090.1
FmdE, molybdenum formylmethanofuran dehydrogenase operon.
 
    0.667
bioC_2
Malonyl-[acyl-carrier protein] O-methyltransferase.
 
 
   0.589
nasF
uroporphyrinogen-III C-methyltransferase.
     
 0.486
hisE
phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
   
   0.462
Your Current Organism:
Peptococcaceae bacterium CEB3
NCBI taxonomy Id: 999898
Other names: P. bacterium CEB3
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