Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLDN1Claudin 1. (211 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
    
 0.996
TJP3
Tight junction protein 3.
    
 0.988
OCLN
Occludin.
   
 0.986
CLDN12
Claudin 12.
     
 0.964
Tjp2
Tight junction protein 2.
    
 0.958
CLDN16
Claudin 16.
   
 0.944
CLDN4
Claudin 4.
   
 0.928
CLDN9
Claudin 9.
   
 
  0.916
PARD3
Par-3 family cell polarity regulator.
    
 0.913
ESAM
Endothelial cell adhesion molecule.
   
 
 0.912
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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