STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLDN1Claudin 1. (211 aa)    
Predicted Functional Partners:
TJP1
Tight junction protein 1.
   
 0.950
TJP3
Tight junction protein 3.
   
 0.943
OCLN
Occludin.
   
 0.934
CLDN4
Claudin 4.
  
0.923
Tjp2
Tight junction protein 2.
   
 0.910
CLDN16
Claudin 16.
   
0.901
CLDN6
Claudin 6.
  
0.887
CLDN5
Claudin 5.
  
  
0.874
CLDN3
Claudin 3.
   
0.864
CLDN9
Claudin 9.
  
 
0.864
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.