STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC5BDnaJ heat shock protein family (Hsp40) member C5 beta. (199 aa)    
Predicted Functional Partners:
ENSUPAP00010015388
annotation not available
     
 0.972
Rims2
Regulating synaptic membrane exocytosis 2.
     
 0.972
TFIP11
Tuftelin interacting protein 11.
    
 
 0.938
CDC5L
Cell division cycle 5 like.
    
 
 0.935
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
  
 0.921
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 
 0.921
PLRG1
Pleiotropic regulator 1.
    
 
 0.917
PRPF19
pre-mRNA processing factor 19.
    
   0.916
BUD31
BUD31 homolog.
    
   0.916
SNW1
SNW domain containing 1.
    
 
 0.896
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.