STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPPA2Pappalysin 2. (1785 aa)    
Predicted Functional Partners:
IGFBP5
Insulin like growth factor binding protein 5.
    
 0.872
TNN
Tenascin N.
    
 0.829
TNR
Tenascin R.
    
 0.829
TNC
Tenascin C.
    
 0.829
ENSUPAP00010024901
annotation not available
    
 0.829
STC2
Stanniocalcin 2.
    
 
 0.773
PRG3
Proteoglycan 3, pro eosinophil major basic protein 2.
    
 0.771
Prg2
Proteoglycan 2, pro eosinophil major basic protein.
    
 0.771
PLA2G4A
Phospholipase A2 group IVA.
     
 0.740
TIMP3
TIMP metallopeptidase inhibitor 3.
    
 0.665
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.