STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARNTAryl hydrocarbon receptor nuclear translocator. (790 aa)    
Predicted Functional Partners:
ENSUPAP00010015421
annotation not available
   
0.992
HIF1A
Hypoxia inducible factor 1 subunit alpha.
   
0.984
EPAS1
Endothelial PAS domain protein 1.
   
0.983
NPAS4
Neuronal PAS domain protein 4.
    
0.982
HIF3A
Hypoxia inducible factor 3 subunit alpha.
   
0.969
Ahrr
Aryl-hydrocarbon receptor repressor.
   
0.959
SIM1
SIM bHLH transcription factor 1.
    
 
0.938
NPAS3
Neuronal PAS domain protein 3.
    
0.936
NPAS1
Neuronal PAS domain protein 1.
    
0.936
EP300
E1A binding protein p300.
    
 0.909
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.