STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
THSD4Thrombospondin type 1 domain containing 4. (1021 aa)    
Predicted Functional Partners:
B3GLCT
Beta 3-glucosyltransferase.
     
 0.700
POFUT2
Protein O-fucosyltransferase 2.
     
 0.637
SPON1
Spondin 1.
     
0.614
SPON2
Spondin 2.
     
 0.515
ACSF2
acyl-CoA synthetase family member 2.
    
  0.482
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
     
0.481
ADAMTS10
ADAM metallopeptidase with thrombospondin type 1 motif 10.
     
0.481
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
     
0.481
DIP2A
Disco interacting protein 2 homolog A.
    
 0.469
DIP2B
Disco interacting protein 2 homolog B.
    
 0.469
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.