STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLCN6Chloride voltage-gated channel 6. (830 aa)    
Predicted Functional Partners:
OSTM1
Osteoclastogenesis associated transmembrane protein 1.
    
 0.974
FAM131B
Family with sequence similarity 131 member B.
     
 0.638
BSND
Barttin CLCNK type accessory beta subunit.
     
 0.635
ENSUPAP00010006634
annotation not available
    
 0.634
LATS1
Large tumor suppressor kinase 1.
    
 0.634
LATS2
Large tumor suppressor kinase 2.
    
 0.634
OCRL
OCRL inositol polyphosphate-5-phosphatase.
   
  
 0.552
CHRNG
Cholinergic receptor nicotinic gamma subunit.
      
 0.549
MED19
Mediator complex subunit 19.
      
 0.549
PRPF3
pre-mRNA processing factor 3.
      
 0.545
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.