STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113199533Glutathione S-transferase theta-1. (240 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 0.999
KARS1
lysyl-tRNA synthetase 1.
   
 0.957
EEF1B2
Eukaryotic translation elongation factor 1 beta 2.
   
 0.941
EEF1D
Eukaryotic translation elongation factor 1 delta.
   
 0.941
MARS1
methionyl-tRNA synthetase 1.
   
 0.940
HPGDS
Hematopoietic prostaglandin D synthase.
    
 0.929
DARS1
aspartyl-tRNA synthetase 1.
   
 0.925
GSTP1
Glutathione S-transferase pi 1.
    
 0.915
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 0.910
QARS1
glutaminyl-tRNA synthetase 1.
   
 0.909
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.