STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010005330annotation not available (125 aa)    
Predicted Functional Partners:
ENSUPAP00010022255
annotation not available
 
      0.895
MEPCE
Methylphosphate capping enzyme.
    
 
 0.696
BCDIN3D
BCDIN3 domain containing RNA methyltransferase.
    
 
 0.608
PRPF4
pre-mRNA processing factor 4.
   
  
 0.577
VIRMA
Vir like m6A methyltransferase associated.
    
 
 0.515
METTL14
Methyltransferase like 14.
   
  
 0.496
METTL3
Methyltransferase like 3.
   
  
 0.464
ZCCHC4
Zinc finger CCHC-type containing 4.
   
  
 0.432
ENSUPAP00010003720
annotation not available
      
 0.424
ZC3H13
Zinc finger CCCH-type containing 13.
      
 0.424
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.