STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM39Tripartite motif containing 39. (488 aa)    
Predicted Functional Partners:
AGO3
Argonaute RISC catalytic component 3.
    
 0.898
AGO2
Argonaute RISC catalytic component 2.
    
 0.895
AGO4
Argonaute RISC component 4.
    
 0.894
AGO1
Argonaute RISC component 1.
    
 0.891
RPP38
Ribonuclease P/MRP subunit p38.
    
  0.888
RPP40
Ribonuclease P/MRP subunit p40.
    
  0.886
TARBP2
TARBP2 subunit of RISC loading complex.
    
  0.885
DICER1
Dicer 1, ribonuclease III.
    
 0.880
DROSHA
Drosha ribonuclease III.
    
 0.874
RPP30
Ribonuclease P/MRP subunit p30.
    
  0.874
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.