STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPR55G protein-coupled receptor 55. (319 aa)    
Predicted Functional Partners:
GNA12
G protein subunit alpha 12.
    
 0.921
GNA13
G protein subunit alpha 13.
    
 0.907
ENSUPAP00010015539
annotation not available
    
 0.880
LPAR1
Lysophosphatidic acid receptor 1.
     
 0.848
LPAR3
Lysophosphatidic acid receptor 3.
     
 0.832
LPAR2
Lysophosphatidic acid receptor 2.
     
 0.832
AVP
Arginine vasopressin.
    
  0.803
AGT
Angiotensinogen.
    
 0.792
F2
Coagulation factor II, thrombin.
    
  0.790
LPAR5
Lysophosphatidic acid receptor 5.
   
 
0.782
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.