STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010006990annotation not available (167 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.999
ENSUPAP00010020417
annotation not available
   
 0.999
RPL8
Ribosomal protein L8.
  
 0.996
RPL28
Ribosomal protein L28.
   
 0.996
RPL19
Ribosomal protein L19.
  
 0.996
RPL6
Ribosomal protein L6.
  
 0.996
RPL14
Ribosomal protein L14.
  
 0.996
RPL13
Ribosomal protein L13.
   
 0.996
RPL4
Ribosomal protein L4.
  
 0.996
RPL11
Ribosomal protein L11.
  
 0.996
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.