STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010007192annotation not available (204 aa)    
Predicted Functional Partners:
LIMK1
LIM domain kinase 1.
   
 0.987
LIMK2
LIM domain kinase 2.
   
 0.966
SSH1
Slingshot protein phosphatase 1.
    
 0.921
SSH3
Slingshot protein phosphatase 3.
    
 0.912
SSH2
Slingshot protein phosphatase 2.
    
 0.907
ENSUPAP00010002090
annotation not available
  
 
0.865
ENSUPAP00010016630
annotation not available
  
 
0.865
CAP1
Cyclase associated actin cytoskeleton regulatory protein 1.
   
 0.860
CAP2
Cyclase associated actin cytoskeleton regulatory protein 2.
   
 0.854
WDR1
WD repeat domain 1.
   
 
 0.852
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.