STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010007288annotation not available (130 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.993
CENPA
Centromere protein A.
   
 0.929
BARD1
BRCA1 associated RING domain 1.
    
 0.906
ENSUPAP00010015029
annotation not available
 
 0.893
LOC113195958
Histone H2B type 1-K.
 
 0.893
EP300
E1A binding protein p300.
    
 0.872
KDM6A
Lysine demethylase 6A.
    
 0.856
KDM6B
Lysine demethylase 6B.
    
 0.856
ENSUPAP00010022117
annotation not available
    
 0.856
H2BU1
H2B.U histone 1.
 
 0.855
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.