STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POC5POC5 centriolar protein. (538 aa)    
Predicted Functional Partners:
CETN3
Centrin 3.
    
 
 0.924
WDR53
WD repeat domain 53.
   
    0.760
CETN1
Centrin 1.
    
 
 0.734
ENSUPAP00010021302
annotation not available
    
 
 0.734
CETN2
Centrin 2.
    
 
 0.734
ENSUPAP00010006992
annotation not available
    
 
 0.702
CRPPA
CDP-L-ribitol pyrophosphorylase A.
    
 
 0.671
CCT4
Chaperonin containing TCP1 subunit 4.
    
 
 0.558
POC1B
POC1 centriolar protein B.
      
 0.553
CEP120
Centrosomal protein 120.
   
  
 0.552
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.