STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP27C1Cytochrome P450 27C1. (372 aa)    
Predicted Functional Partners:
CYP2R1
Cytochrome P450 family 2 subfamily R member 1.
  
0.897
CYP26A1
Cytochrome P450 family 26 subfamily A member 1.
  
 
0.878
DHRS9
Dehydrogenase/reductase 9.
     
 0.853
RETSAT
Retinol saturase.
    
 0.851
RDH10
Retinol dehydrogenase 10.
   
 
 0.847
Rdh8
Retinol dehydrogenase 8.
   
 
 0.845
LRAT
Lecithin retinol acyltransferase.
     
 0.843
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
 0.839
DGAT1
Diacylglycerol O-acyltransferase 1.
     
 0.837
CYP24A1
1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial.
  
 
 
0.836
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.