STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNC1Plexin C1. (1574 aa)    
Predicted Functional Partners:
SEMA7A
Semaphorin 7A (John Milton Hagen blood group).
    
 0.994
SEMA4D
Semaphorin 4D.
    
0.939
NRP1
Neuropilin 1.
    
 0.900
PLXND1
Plexin D1.
     
0.896
PLXNB2
Plexin B2.
    
0.857
SEMA3E
Semaphorin 3E.
    
0.841
ENSUPAP00010019135
annotation not available
    
 0.831
SEMA3B
Semaphorin 3B.
    
 0.826
SEMA6A
Semaphorin 6A.
    
 0.821
RHOD
Ras homolog family member D.
    
 0.810
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.