STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DND1DND microRNA-mediated repression inhibitor 1. (353 aa)    
Predicted Functional Partners:
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.972
DHX9
DExH-box helicase 9.
   
 0.836
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
   0.811
ENSUPAP00010020417
annotation not available
    
   0.811
GAPDHS
Glyceraldehyde-3-phosphate dehydrogenase, spermatogenic.
    
 0.788
ENSUPAP00010018962
annotation not available
   
 0.755
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.745
ENSUPAP00010014285
annotation not available
   
 0.745
SRSF3
Serine and arginine rich splicing factor 3.
   
 0.712
YBX2
Y-box binding protein 2.
    
 0.684
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.