STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNASE2Deoxyribonuclease 2, lysosomal. (352 aa)    
Predicted Functional Partners:
DNASE2B
Deoxyribonuclease 2 beta.
  
  
0.840
GNS
Glucosamine (N-acetyl)-6-sulfatase.
   
 0.725
CTSZ
Cathepsin Z.
   
 
 0.672
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
    
  0.632
VAMP8
Vesicle associated membrane protein 8.
     
 0.629
AP1G2
Adaptor related protein complex 1 subunit gamma 2.
     
 0.623
ENSUPAP00010019979
annotation not available
   
 
 0.618
ENSUPAP00010030465
annotation not available
   
 
 0.618
AP1G1
Adaptor related protein complex 1 subunit gamma 1.
     
 0.610
AP1S1
Adaptor related protein complex 1 subunit sigma 1.
     
 0.609
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.