STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NACC1Nucleus accumbens associated 1. (539 aa)    
Predicted Functional Partners:
Nanog
Nanog homeobox.
    
 0.846
FBXL19
F-box and leucine rich repeat protein 19.
   
  0.814
SCAF1
SR-related CTD associated factor 1.
   
    0.792
GADD45GIP1
GADD45G interacting protein 1.
    
 
 0.698
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.671
ENSUPAP00010015574
annotation not available
    
  0.649
POLR2C
RNA polymerase II subunit C.
    
 0.640
HDAC4
Histone deacetylase 4.
    
 0.622
ENSUPAP00010004433
annotation not available
    
 0.613
ENSUPAP00010005356
annotation not available
    
 0.613
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.