STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PBLDPhenazine biosynthesis like protein domain containing. (288 aa)    
Predicted Functional Partners:
AZIN2
Antizyme inhibitor 2.
    
  0.818
ODC1
Ornithine decarboxylase 1.
    
  0.818
AZIN1
Antizyme inhibitor 1.
    
  0.818
ENSUPAP00010024657
annotation not available
    
  0.818
ENSUPAP00010028407
annotation not available
    
 0.800
PM20D1
Peptidase M20 domain containing 1.
    
 0.798
CNDP2
Carnosine dipeptidase 2.
    
  0.797
CNDP1
Carnosine dipeptidase 1.
    
  0.797
CXXC1
CXXC finger protein 1.
    
   0.633
STRAP
Serine/threonine kinase receptor associated protein.
    
 
 0.628
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.