KDM5B protein (Urocitellus parryii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KDM5B

Lysine demethylase 5B. (1544 aa)

Predicted Functional Partners:

ATP5F1C

0.987

Atp5po

0.987

ATP5F1A

0.987

ATP5F1D

0.987

ENSUPAP00010001797

0.974

ENSUPAP00010010684

0.974

ATP5PD

0.954

SUZ12

0.942

BIRC6

0.933

EED

0.924

Your Current Organism:

Urocitellus parryii

NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	ATP5F1C	ENSUPAP00010013279	ENSUPAP00010002180	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit gamma.	0.999
ATP5F1A	ATP5F1D	ENSUPAP00010013279	ENSUPAP00010017026	ATP synthase F1 subunit alpha.	ATP synthase F1 subunit delta.	0.999
ATP5F1A	ATP5PD	ENSUPAP00010013279	ENSUPAP00010030544	ATP synthase F1 subunit alpha.	ATP synthase peripheral stalk subunit d.	0.999
ATP5F1A	Atp5po	ENSUPAP00010013279	ENSUPAP00010003406	ATP synthase F1 subunit alpha.	ATP synthase peripheral stalk subunit OSCP.	0.999
ATP5F1A	BIRC6	ENSUPAP00010013279	ENSUPAP00010001606	ATP synthase F1 subunit alpha.	Baculoviral IAP repeat containing 6.	0.794
ATP5F1A	ENSUPAP00010001797	ENSUPAP00010013279	ENSUPAP00010001797	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1A	ENSUPAP00010010684	ENSUPAP00010013279	ENSUPAP00010010684	ATP synthase F1 subunit alpha.	annotation not available	0.999
ATP5F1A	KDM5B	ENSUPAP00010013279	ENSUPAP00010010379	ATP synthase F1 subunit alpha.	Lysine demethylase 5B.	0.987
ATP5F1C	ATP5F1A	ENSUPAP00010002180	ENSUPAP00010013279	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit alpha.	0.999
ATP5F1C	ATP5F1D	ENSUPAP00010002180	ENSUPAP00010017026	ATP synthase F1 subunit gamma.	ATP synthase F1 subunit delta.	0.999
ATP5F1C	ATP5PD	ENSUPAP00010002180	ENSUPAP00010030544	ATP synthase F1 subunit gamma.	ATP synthase peripheral stalk subunit d.	0.999
ATP5F1C	Atp5po	ENSUPAP00010002180	ENSUPAP00010003406	ATP synthase F1 subunit gamma.	ATP synthase peripheral stalk subunit OSCP.	0.999
ATP5F1C	ENSUPAP00010001797	ENSUPAP00010002180	ENSUPAP00010001797	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1C	ENSUPAP00010010684	ENSUPAP00010002180	ENSUPAP00010010684	ATP synthase F1 subunit gamma.	annotation not available	0.999
ATP5F1C	KDM5B	ENSUPAP00010002180	ENSUPAP00010010379	ATP synthase F1 subunit gamma.	Lysine demethylase 5B.	0.987
ATP5F1D	ATP5F1A	ENSUPAP00010017026	ENSUPAP00010013279	ATP synthase F1 subunit delta.	ATP synthase F1 subunit alpha.	0.999
ATP5F1D	ATP5F1C	ENSUPAP00010017026	ENSUPAP00010002180	ATP synthase F1 subunit delta.	ATP synthase F1 subunit gamma.	0.999
ATP5F1D	ATP5PD	ENSUPAP00010017026	ENSUPAP00010030544	ATP synthase F1 subunit delta.	ATP synthase peripheral stalk subunit d.	0.999
ATP5F1D	Atp5po	ENSUPAP00010017026	ENSUPAP00010003406	ATP synthase F1 subunit delta.	ATP synthase peripheral stalk subunit OSCP.	0.999
ATP5F1D	ENSUPAP00010001797	ENSUPAP00010017026	ENSUPAP00010001797	ATP synthase F1 subunit delta.	annotation not available	0.999