STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF462Zinc finger protein 462. (2505 aa)    
Predicted Functional Partners:
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.688
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.656
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.655
ENSUPAP00010015574
annotation not available
    
  0.649
ASXL2
ASXL transcriptional regulator 2.
     
 0.628
EHMT2
Solute carrier family 44 member 4.
   
 0.617
EHMT1
Euchromatic histone lysine methyltransferase 1.
   
 0.608
EXOC2
Exocyst complex component 2.
    
 
 0.598
VAX1
Ventral anterior homeobox 1.
    
 
 0.598
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.594
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.