STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN18Tetraspanin 18. (248 aa)    
Predicted Functional Partners:
CD19
CD19 molecule.
   
 0.757
CD82
CD82 molecule.
  
  
0.727
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.707
MST1R
Macrophage stimulating 1 receptor.
    
  0.703
PTGFRN
Prostaglandin F2 receptor inhibitor.
    
 
 0.573
ADAM10
ADAM metallopeptidase domain 10.
    
 0.558
TXNL4B
Thioredoxin like 4B.
      
 0.544
GHITM
Growth hormone inducible transmembrane protein.
      
 0.539
PDGFB
Platelet derived growth factor subunit B.
    
 0.538
CD300LG
CD300 molecule like family member g.
    
 0.512
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.