STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNP2',3'-cyclic nucleotide 3' phosphodiesterase. (419 aa)    
Predicted Functional Partners:
NDUFB7
NADH:ubiquinone oxidoreductase subunit B7.
   
  0.926
NDUFV1
NADH:ubiquinone oxidoreductase core subunit V1.
    
  0.789
ENSUPAP00010014312
annotation not available
   
  0.767
NDUFA12
NADH:ubiquinone oxidoreductase subunit A12.
   
  0.758
NDUFS2
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.757
NDUFA8
NADH:ubiquinone oxidoreductase subunit A8.
   
  0.757
NDUFS1
NADH:ubiquinone oxidoreductase core subunit S1.
    
  0.756
NDUFB10
NADH:ubiquinone oxidoreductase subunit B10.
    
  0.753
NDUFV2
NADH:ubiquinone oxidoreductase core subunit V2.
    
 0.752
NDUFS8
NADH:ubiquinone oxidoreductase core subunit S8.
    
  0.747
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.