STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A4Solute carrier family 30 member 4. (428 aa)    
Predicted Functional Partners:
SLC39A13
Solute carrier family 39 member 13.
   
 0.704
SLC39A4
Solute carrier family 39 member 4.
   
 0.653
ENSUPAP00010003245
annotation not available
   
 0.649
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.622
SLC39A7
Solute carrier family 39 member 7.
   
 0.615
SLC39A6
Solute carrier family 39 member 6.
   
 0.599
SLC30A6
Solute carrier family 30 member 6.
    
 
 0.580
SLC39A9
Solute carrier family 39 member 9.
    
 
 0.577
SLC39A1
Solute carrier family 39 member 1.
    
 
 0.576
SLC39A12
Solute carrier family 39 member 12.
   
 0.554
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.