STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMBIM6Transmembrane BAX inhibitor motif containing 6. (237 aa)    
Predicted Functional Partners:
DESI1
Desumoylating isopeptidase 1.
    
   0.984
ENSUPAP00010000109
annotation not available
    
   0.822
DESI2
Desumoylating isopeptidase 2.
    
   0.822
BAK1
BCL2 antagonist/killer 1.
    
 0.799
PSEN2
Presenilin 2.
    
 
 0.795
PSEN1
Presenilin 1.
    
 
 0.795
GHITM
Growth hormone inducible transmembrane protein.
   
  
 0.708
BCL2
BCL2 apoptosis regulator.
    
 0.678
Bcl2l1
BCL2 like 1.
    
 0.559
ENSUPAP00010024857
annotation not available
    
 0.559
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.