STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NGEFNeuronal guanine nucleotide exchange factor. (707 aa)    
Predicted Functional Partners:
EPHA1
EPH receptor A1.
    
 0.929
EPHA4
EPH receptor A4.
    
 0.916
EPHA5
EPH receptor A5.
    
 0.893
EPHB2
EPH receptor B2.
    
 0.870
EPHB1
EPH receptor B1.
    
 0.870
EPHA7
EPH receptor A7.
    
 0.864
EPHA6
EPH receptor A6.
    
 0.864
EPHA3
EPH receptor A3.
    
 0.864
EPHA2
EPH receptor A2.
    
 0.863
EPHB3
EPH receptor B3.
    
 0.862
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.