STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSUPAP00010013326annotation not available (154 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.942
ENSUPAP00010027705
annotation not available
    
 0.918
ENSUPAP00010004754
annotation not available
    
 0.912
ENSUPAP00010007481
annotation not available
    
 0.874
ENSUPAP00010008336
annotation not available
    
 0.794
ENSUPAP00010012103
annotation not available
    
 0.794
ENSUPAP00010013321
annotation not available
    
 0.794
ENSUPAP00010015492
annotation not available
    
 0.794
UBE2D4
Ubiquitin conjugating enzyme E2 D4 (putative).
    
 0.794
ENSUPAP00010021628
annotation not available
    
 0.794
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.