STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EMP3Epithelial membrane protein 3. (163 aa)    
Predicted Functional Partners:
LGALS1
Galectin 1.
   
  
 0.798
S100A4
S100 calcium binding protein A4.
   
  
 0.759
ENSUPAP00010013553
annotation not available
   
    0.748
EPB42
Erythrocyte membrane protein band 4.2.
      
 0.543
ENSUPAP00010011393
annotation not available
      
 0.540
ANXA1
Annexin A1.
   
  
 0.482
TNFRSF12A
TNF receptor superfamily member 12A.
      
 0.455
FUT1
Fucosyltransferase 1 (H blood group).
      
 0.451
RHAG
Rh associated glycoprotein.
      
 0.439
PLP2
Proteolipid protein 2.
   
   0.427
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.