STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSBPL1AOxysterol binding protein like 1A. (950 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.986
MOSPD2
Motile sperm domain containing 2.
    
 
 0.951
VAPA
VAMP associated protein A.
    
 
 0.853
RILP
Rab interacting lysosomal protein.
   
 0.793
VAPB
VAMP associated protein B and C.
    
 
 0.739
RILPL1
Rab interacting lysosomal protein like 1.
   
 0.739
RAB8B
RAB8B, member RAS oncogene family.
   
 0.554
RAB8A
RAB8A, member RAS oncogene family.
    
 0.550
FAM189B
Family with sequence similarity 189 member B.
    
 0.549
GAREM2
GRB2 associated regulator of MAPK1 subtype 2.
    
 0.549
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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