STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASB11Ankyrin repeat and SOCS box containing 11. (323 aa)    
Predicted Functional Partners:
ENSUPAP00010023148
annotation not available
    
 0.862
ELOC
Elongin C.
    
 0.839
ENSUPAP00010025184
annotation not available
    
 0.839
ENSUPAP00010028488
annotation not available
    
 0.839
CUL5
Cullin 5.
   
 0.837
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.826
IFT81
Intraflagellar transport 81.
    
 0.764
JPH2
Junctophilin 2.
   
 0.721
JPH3
Junctophilin 3.
   
 0.721
ASB6
Ankyrin repeat and SOCS box containing 6.
  
 
 0.714
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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