STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GDAP2Ganglioside induced differentiation associated protein 2. (511 aa)    
Predicted Functional Partners:
AKT1S1
AKT1 substrate 1.
   
    0.744
MACROH2A2
macroH2A.2 histone.
  
 
 
 0.664
AIFM1
Apoptosis inducing factor mitochondria associated 1.
  
 0.581
HDAC11
Histone deacetylase 11.
   
 0.577
DTX3L
Deltex E3 ubiquitin ligase 3L.
   
 
 0.577
WDR3
WD repeat domain 3.
      
 0.546
IGSF3
Immunoglobulin superfamily member 3.
      
 0.544
PTGFRN
Prostaglandin F2 receptor inhibitor.
      
 0.544
MACROH2A1
macroH2A.1 histone.
  
 
 
0.514
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
 0.439
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.