STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IYDIodotyrosine deiodinase. (285 aa)    
Predicted Functional Partners:
RFK
Riboflavin kinase.
    
 0.916
METAP1D
Methionyl aminopeptidase type 1D, mitochondrial.
  
 
 0.910
UROS
Uroporphyrinogen III synthase.
  
 
 0.907
EPHX2
Epoxide hydrolase 2.
  
 
 0.904
Adi1
Acireductone dioxygenase 1.
    
 0.877
ENSUPAP00010005547
annotation not available
    
 0.871
UROD
Uroporphyrinogen decarboxylase.
    
 0.871
TSTD1
Thiosulfate sulfurtransferase like domain containing 1.
    
 0.861
ENSUPAP00010012505
annotation not available
    
 0.861
ENSUPAP00010001170
annotation not available
    
 0.860
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.