STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARSBphenylalanyl-tRNA synthetase subunit beta. (589 aa)    
Predicted Functional Partners:
FARSA
phenylalanyl-tRNA synthetase subunit alpha.
  
 0.999
FDXACB1
Ferredoxin-fold anticodon binding domain containing 1.
  
 0.998
ENSUPAP00010006923
annotation not available
  
 0.997
EEF1B2
Eukaryotic translation elongation factor 1 beta 2.
 
 
 
  0.993
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.978
YARS1
tyrosyl-tRNA synthetase 1.
  
  
 0.970
IARS1
isoleucyl-tRNA synthetase 1.
  
 
 0.949
IARS2
isoleucyl-tRNA synthetase 2, mitochondrial.
  
 
 0.941
RPS15
Ribosomal protein S15.
  
 
 0.922
EEF1D
Eukaryotic translation elongation factor 1 delta.
 
 
 
  0.919
Your Current Organism:
Urocitellus parryii
NCBI taxonomy Id: 9999
Other names: Arctic ground squirrel, Citellus parryii, Spermophilus parryi, Spermophilus parryii, U. parryii
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.